ITMO_FS.filters.multivariate.TraceRatioFisher

class ITMO_FS.filters.multivariate.TraceRatioFisher(n_selected_features)

Creates TraceRatio(similarity based) feature selection filter performed in supervised way, i.e fisher version

Parameters:n_selected_features (int) – Amount of features to filter

Notes

For more details see this paper.

Examples

>>> from ITMO_FS.filters.multivariate import TraceRatioFisher
>>> from sklearn.datasets import make_classification
>>> x, y = make_classification(1000, 100, n_informative = 10,n_redundant = 30, n_repeated = 10, shuffle = False)
>>> tracer = TraceRatioFisher(10)
>>> print(tracer.fit_transform(x, y))
__init__(n_selected_features)

Initialize self. See help(type(self)) for accurate signature.

fit(X, y, feature_names=None)

Fits filter

Parameters:
  • X (numpy array, shape (n_samples, n_features)) – The training input samples
  • y (numpy array, shape (n_samples, )) – The target values
  • feature_names (list of strings, optional) – In case you want to define feature names
Returns:

Return type:

None

Examples

fit_transform(X, y, feature_names=None)

Fits the filter and transforms given dataset X.

Parameters:
  • X (array-like, shape (n_features, n_samples)) – The training input samples.
  • y (array-like, shape (n_samples, )) – The target values.
  • feature_names (list of strings, optional) – In case you want to define feature names
Returns:

Return type:

X dataset sliced with features selected by the filter

transform(X)

Transform given data by slicing it with selected features.

Parameters:X (array-like, shape (n_samples, n_features)) – The training input samples.
Returns:
Return type:Transformed 2D numpy array